Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AC004461.1-201ENST00000412461 403 ntBASIC15.03■□□□□ -0
RPH3AQ9Y2J0 KRT18P34-201ENST00000488218 1270 ntBASIC15.03■□□□□ -0
RPH3AQ9Y2J0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AC243562.1-201ENST00000560672 389 ntBASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AL031731.1-201ENST00000642131 2094 ntBASIC15.03■□□□□ -0
RPH3AQ9Y2J0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AKAP8P1-201ENST00000434743 1349 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AL118508.1-201ENST00000613502 2345 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AC005237.2-201ENST00000434368 219 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AL592309.1-201ENST00000443127 649 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AP000344.2-201ENST00000512987 629 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 IGHV3-62-201ENST00000520057 340 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AC004835.2-201ENST00000603762 682 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AL513210.1-201ENST00000629608 234 ntBASIC15.02■□□□□ -0
RPH3AQ9Y2J0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.02■□□□□ -0
RPH3AQ9Y2J0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPH3AQ9Y2J0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms