Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 FOXO1B-201ENST00000504678 1527 ntBASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 AL662844.4-201ENST00000606367 2838 ntBASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLIP2Q9UDT6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 AL596257.1-201ENST00000641463 2694 ntBASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 SPDYE7P-202ENST00000420373 878 ntBASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 KLF2P3-201ENST00000451977 1087 ntBASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 AL390955.2-201ENST00000603032 514 ntBASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 MIR6080-201ENST00000617359 66 ntBASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 AP3S2-216ENST00000617003 1561 ntBASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIP2Q9UDT6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 MIR4453-201ENST00000584019 89 ntBASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.34■□□□□ 0.69
CLIP2Q9UDT6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms