Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC090616.6-203ENST00000579186 1945 ntBASIC16.11■□□□□ 0.17
MKS1Q9NXB0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
MKS1Q9NXB0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 TCAF2P1-201ENST00000291129 2421 ntBASIC16.1■□□□□ 0.17
MKS1Q9NXB0 CICP13-201ENST00000422015 2789 ntBASIC16.1■□□□□ 0.17
MKS1Q9NXB0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AL136379.1-201ENST00000623471 2642 ntBASIC16.1■□□□□ 0.17
MKS1Q9NXB0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MKS1Q9NXB0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.09■□□□□ 0.17
MKS1Q9NXB0 OR7E14P-202ENST00000530490 1290 ntBASIC16.09■□□□□ 0.17
MKS1Q9NXB0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 AL645728.2-201ENST00000641974 660 ntBASIC16.09■□□□□ 0.17
MKS1Q9NXB0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MKS1Q9NXB0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.08■□□□□ 0.17
MKS1Q9NXB0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.08■□□□□ 0.17
MKS1Q9NXB0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MKS1Q9NXB0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MKS1Q9NXB0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms