Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.21■□□□□ 0.51
CCSER1Q9C0I3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCSER1Q9C0I3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CCSER1Q9C0I3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCSER1Q9C0I3 AC008741.2-201ENST00000612792 3115 ntBASIC18.21■□□□□ 0.5
CCSER1Q9C0I3 AP001282.1-201ENST00000531301 1499 ntBASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 AL592309.1-201ENST00000443127 649 ntBASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 CEND1P1-201ENST00000451006 455 ntBASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 IGHV3-62-201ENST00000520057 340 ntBASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 AC022145.2-201ENST00000598203 171 ntBASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 GPALPP1-207ENST00000611650 899 ntBASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCSER1Q9C0I3 AC011477.6-201ENST00000604980 1927 ntBASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 AC139530.3-201ENST00000620344 690 ntBASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 AL513210.1-201ENST00000629608 234 ntBASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCSER1Q9C0I3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms