Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 DFFBP1-201ENST00000433250 979 ntBASIC16.95■□□□□ 0.3
LRRC3Q9BY71 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AL139010.1-201ENST00000454878 894 ntBASIC16.95■□□□□ 0.3
LRRC3Q9BY71 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AC140912.1-201ENST00000577171 1054 ntBASIC16.95■□□□□ 0.3
LRRC3Q9BY71 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 CHCHD2P3-201ENST00000603038 451 ntBASIC16.95■□□□□ 0.3
LRRC3Q9BY71 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 CU639417.3-201ENST00000624240 1404 ntBASIC16.95■□□□□ 0.3
LRRC3Q9BY71 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 SPDYE19P-201ENST00000338590 713 ntBASIC16.94■□□□□ 0.3
LRRC3Q9BY71 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 DOC2GP-202ENST00000514950 1163 ntBASIC16.94■□□□□ 0.3
LRRC3Q9BY71 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 MIR4321-201ENST00000592276 80 ntBASIC16.94■□□□□ 0.3
LRRC3Q9BY71 SRD5A3P1-201ENST00000603021 949 ntBASIC16.94■□□□□ 0.3
LRRC3Q9BY71 AC004461.2-201ENST00000629517 803 ntBASIC16.94■□□□□ 0.3
LRRC3Q9BY71 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 HLA-A-202ENST00000376806 1854 ntBASIC16.94■□□□□ 0.3
LRRC3Q9BY71 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC3Q9BY71 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 AL118508.1-201ENST00000613502 2345 ntBASIC16.93■□□□□ 0.3
LRRC3Q9BY71 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 DGCR5-201ENST00000399539 862 ntBASIC16.93■□□□□ 0.3
LRRC3Q9BY71 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 HIST3H2BA-201ENST00000436555 524 ntBASIC16.93■□□□□ 0.3
LRRC3Q9BY71 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 SDHAP3-202ENST00000515467 728 ntBASIC16.93■□□□□ 0.3
LRRC3Q9BY71 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC3Q9BY71 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms