Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 HLA-H-201ENST00000383620 1096 ntBASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 AC125807.1-201ENST00000483097 614 ntBASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 AC093512.1-201ENST00000617969 520 ntBASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 AC079328.2-201ENST00000561241 3354 ntBASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 TUBB3P1-201ENST00000405796 1332 ntBASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 KLF2P3-201ENST00000451977 1087 ntBASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 SPTSSB-204ENST00000617024 1292 ntBASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSBP3Q9BWW4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP3Q9BWW4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms