Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 FAAHP1-202ENST00000446499 1238 ntBASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 KRT126P-201ENST00000549467 1181 ntBASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 AC013467.2-201ENST00000605472 835 ntBASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 GGTLC5P-201ENST00000617623 998 ntBASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHRDL1Q9BU40 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 MPDU1-223ENST00000582151 728 ntBASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 AC104692.2-201ENST00000603054 253 ntBASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 AC008667.4-201ENST00000607370 168 ntBASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 FAM215A-202ENST00000632077 792 ntBASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRDL1Q9BU40 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 RPS2P28-201ENST00000314255 741 ntBASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CHRDL1Q9BU40 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms