Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AL512652.2-201ENST00000625156 1716 ntBASIC14.95□□□□□ -0.02
SNX18Q96RF0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 AC129492.6-201ENST00000611383 1305 ntBASIC14.94□□□□□ -0.02
SNX18Q96RF0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 SLC25A6P2-201ENST00000497974 877 ntBASIC14.94□□□□□ -0.02
SNX18Q96RF0 RNA5SP419-201ENST00000515908 135 ntBASIC14.94□□□□□ -0.02
SNX18Q96RF0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 AC005412.3-201ENST00000580309 715 ntBASIC14.94□□□□□ -0.02
SNX18Q96RF0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 AP001350.2-201ENST00000625104 1094 ntBASIC14.94□□□□□ -0.02
SNX18Q96RF0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 GRK6P1-201ENST00000400595 1711 ntBASIC14.94□□□□□ -0.02
SNX18Q96RF0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX18Q96RF0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNX18Q96RF0 AC006504.4-201ENST00000592118 1568 ntBASIC14.94□□□□□ -0.02
SNX18Q96RF0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.93□□□□□ -0.02
SNX18Q96RF0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 SNX18-202ENST00000343017 3140 ntBASIC14.93□□□□□ -0.02
SNX18Q96RF0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 HCG4-201ENST00000418983 998 ntBASIC14.93□□□□□ -0.02
SNX18Q96RF0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms