Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 AC142381.1-201ENST00000426099 345 ntBASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 LINC01225-203ENST00000563550 1244 ntBASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 MTDHP5-201ENST00000598980 586 ntBASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PDLIM5Q96HC4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 LINC00554-201ENST00000564841 3011 ntBASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 AL022342.1-201ENST00000400363 863 ntBASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 KRT8P23-201ENST00000560090 1207 ntBASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 AC026120.1-201ENST00000611536 926 ntBASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 AC084121.4-201ENST00000641598 221 ntBASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 AF228730.8-201ENST00000642140 221 ntBASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM5Q96HC4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms