Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 TFAMP1-201ENST00000412727 736 ntBASIC19.41■□□□□ 0.7
DDX11Q96FC9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 AP001350.2-201ENST00000625104 1094 ntBASIC19.41■□□□□ 0.7
DDX11Q96FC9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.41■□□□□ 0.7
DDX11Q96FC9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 GPAA1P2-202ENST00000606848 1787 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 HMGA1P7-201ENST00000406908 502 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 HCG4-201ENST00000418983 998 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 RN7SL589P-201ENST00000481268 310 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 AC079140.1-201ENST00000508039 487 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 AC009093.7-201ENST00000623853 1223 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 AC012569.1-201ENST00000591191 1524 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.4■□□□□ 0.7
DDX11Q96FC9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX11Q96FC9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX11Q96FC9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DDX11Q96FC9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DDX11Q96FC9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DDX11Q96FC9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 SPCS2P1-201ENST00000561636 679 ntBASIC19.39■□□□□ 0.69
DDX11Q96FC9 RARRES2P8-201ENST00000566335 367 ntBASIC19.39■□□□□ 0.69
DDX11Q96FC9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 AL161645.1-201ENST00000622716 1255 ntBASIC19.39■□□□□ 0.69
DDX11Q96FC9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 PAUPAR-201ENST00000630360 2965 ntBASIC19.39■□□□□ 0.69
DDX11Q96FC9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms