Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.44□□□□□ -0.1
AP3S1Q92572 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S1Q92572 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AP3S1Q92572 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.43□□□□□ -0.1
AP3S1Q92572 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
AP3S1Q92572 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
AP3S1Q92572 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.43□□□□□ -0.1
AP3S1Q92572 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
AP3S1Q92572 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
AP3S1Q92572 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
AP3S1Q92572 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.43□□□□□ -0.1
AP3S1Q92572 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.43□□□□□ -0.1
AP3S1Q92572 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.43□□□□□ -0.1
AP3S1Q92572 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.43□□□□□ -0.1
AP3S1Q92572 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
AP3S1Q92572 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
AP3S1Q92572 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.43□□□□□ -0.1
AP3S1Q92572 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S1Q92572 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S1Q92572 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AP3S1Q92572 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 AL359258.3-201ENST00000622910 2331 ntBASIC14.42□□□□□ -0.1
AP3S1Q92572 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AP3S1Q92572 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 TERC-201ENST00000602385 541 ntBASIC14.42□□□□□ -0.1
AP3S1Q92572 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.42□□□□□ -0.1
AP3S1Q92572 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.42□□□□□ -0.1
AP3S1Q92572 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.42□□□□□ -0.1
AP3S1Q92572 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 AC087386.2-201ENST00000623212 4637 ntBASIC14.42□□□□□ -0.1
AP3S1Q92572 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S1Q92572 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms