Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC144CPQ8IYA2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 WASH6P-202ENST00000359512 1437 ntBASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 AC079140.1-201ENST00000508039 487 ntBASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 AL135744.1-201ENST00000565098 629 ntBASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 RARRES2P8-201ENST00000566335 367 ntBASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 AL161645.1-201ENST00000622716 1255 ntBASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 AC007950.2-201ENST00000615045 2347 ntBASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC144CPQ8IYA2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 TFAMP1-201ENST00000412727 736 ntBASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 AC005237.2-201ENST00000434368 219 ntBASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 AL592309.1-201ENST00000443127 649 ntBASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 BCRP1-201ENST00000444246 691 ntBASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 AL138918.1-201ENST00000568306 659 ntBASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC144CPQ8IYA2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms