Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 AC023824.1-201ENST00000562945 2975 ntBASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 AC073439.1-201ENST00000624121 1774 ntBASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 CYP2T1P-202ENST00000641596 2535 ntBASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 PRYP6-201ENST00000514804 343 ntBASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 AC084121.4-201ENST00000641598 221 ntBASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 AF228730.8-201ENST00000642140 221 ntBASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFWD3Q6PCD5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 HLA-J-202ENST00000469281 1241 ntBASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 RFPL4AP1-201ENST00000530883 850 ntBASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 Z92544.3-201ENST00000624747 417 ntBASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 AC024909.3-201ENST00000611513 2257 ntBASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 CROCCP1-201ENST00000426910 5675 ntBASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFWD3Q6PCD5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 FOXO1B-201ENST00000504678 1527 ntBASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFWD3Q6PCD5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms