Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.5□□□□□ -0.25
SRPXP78539 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.5□□□□□ -0.25
SRPXP78539 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 NSUN5P1-202ENST00000421140 1535 ntBASIC13.5□□□□□ -0.25
SRPXP78539 NSUN5P2-203ENST00000457352 1529 ntBASIC13.5□□□□□ -0.25
SRPXP78539 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.5□□□□□ -0.25
SRPXP78539 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 AC005521.1-201ENST00000393351 872 ntBASIC13.5□□□□□ -0.25
SRPXP78539 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SRPXP78539 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.5□□□□□ -0.25
SRPXP78539 KRT17P6-201ENST00000453795 1220 ntBASIC13.5□□□□□ -0.25
SRPXP78539 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.5□□□□□ -0.25
SRPXP78539 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SRPXP78539 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SRPXP78539 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.5□□□□□ -0.25
SRPXP78539 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.5□□□□□ -0.25
SRPXP78539 U82695.1-201ENST00000635752 1889 ntBASIC13.5□□□□□ -0.25
SRPXP78539 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.5□□□□□ -0.25
SRPXP78539 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.5□□□□□ -0.25
SRPXP78539 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRPXP78539 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.5□□□□□ -0.25
SRPXP78539 AC006486.2-201ENST00000624246 2199 ntBASIC13.49□□□□□ -0.25
SRPXP78539 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 HCG4-201ENST00000418983 998 ntBASIC13.49□□□□□ -0.25
SRPXP78539 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 AC022616.7-201ENST00000525383 220 ntBASIC13.49□□□□□ -0.25
SRPXP78539 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.49□□□□□ -0.25
SRPXP78539 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 AL139424.1-201ENST00000607572 797 ntBASIC13.49□□□□□ -0.25
SRPXP78539 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 REXO1L3P-201ENST00000622202 1288 ntBASIC13.49□□□□□ -0.25
SRPXP78539 AC133561.5-201ENST00000635547 218 ntBASIC13.49□□□□□ -0.25
SRPXP78539 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SRPXP78539 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRPXP78539 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRPXP78539 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRPXP78539 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.48□□□□□ -0.25
SRPXP78539 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRPXP78539 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRPXP78539 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRPXP78539 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRPXP78539 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SRPXP78539 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRPXP78539 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRPXP78539 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms