Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 AC004461.1-201ENST00000412461 403 ntBASIC15.91■□□□□ 0.14
YBX1P67809 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.91■□□□□ 0.14
YBX1P67809 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
YBX1P67809 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.91■□□□□ 0.14
YBX1P67809 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.91■□□□□ 0.14
YBX1P67809 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
YBX1P67809 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 AC022145.2-201ENST00000598203 171 ntBASIC15.91■□□□□ 0.14
YBX1P67809 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.91■□□□□ 0.14
YBX1P67809 AL596442.2-201ENST00000610240 980 ntBASIC15.91■□□□□ 0.14
YBX1P67809 AL691403.2-201ENST00000618460 490 ntBASIC15.91■□□□□ 0.14
YBX1P67809 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
YBX1P67809 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
YBX1P67809 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
YBX1P67809 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
YBX1P67809 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.91■□□□□ 0.14
YBX1P67809 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
YBX1P67809 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.91■□□□□ 0.14
YBX1P67809 AC104640.1-201ENST00000562617 2109 ntBASIC15.91■□□□□ 0.14
YBX1P67809 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
YBX1P67809 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.91■□□□□ 0.14
YBX1P67809 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.9■□□□□ 0.14
YBX1P67809 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
YBX1P67809 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
YBX1P67809 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.9■□□□□ 0.14
YBX1P67809 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.9■□□□□ 0.14
YBX1P67809 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 SPCS2P4-201ENST00000436160 681 ntBASIC15.9■□□□□ 0.14
YBX1P67809 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.9■□□□□ 0.14
YBX1P67809 ACTG1P14-201ENST00000446382 1122 ntBASIC15.9■□□□□ 0.14
YBX1P67809 DNAJB3-202ENST00000449667 1266 ntBASIC15.9■□□□□ 0.14
YBX1P67809 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.9■□□□□ 0.14
YBX1P67809 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 AC093520.2-201ENST00000561830 333 ntBASIC15.9■□□□□ 0.14
YBX1P67809 LINC01225-203ENST00000563550 1244 ntBASIC15.9■□□□□ 0.14
YBX1P67809 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
YBX1P67809 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.9■□□□□ 0.14
YBX1P67809 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.9■□□□□ 0.14
YBX1P67809 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YBX1P67809 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 AC073439.1-201ENST00000624121 1774 ntBASIC15.9■□□□□ 0.14
YBX1P67809 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.9■□□□□ 0.14
YBX1P67809 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.9■□□□□ 0.14
YBX1P67809 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms