Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 AC002347.1-201ENST00000569543 541 ntBASIC15.44■□□□□ 0.06
WNT3P56703 AL513190.1-201ENST00000621254 727 ntBASIC15.44■□□□□ 0.06
WNT3P56703 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
WNT3P56703 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
WNT3P56703 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
WNT3P56703 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
WNT3P56703 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
WNT3P56703 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
WNT3P56703 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
WNT3P56703 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
WNT3P56703 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
WNT3P56703 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.44■□□□□ 0.06
WNT3P56703 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.43■□□□□ 0.06
WNT3P56703 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.43■□□□□ 0.06
WNT3P56703 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 AL078644.1-201ENST00000609881 752 ntBASIC15.43■□□□□ 0.06
WNT3P56703 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
WNT3P56703 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.43■□□□□ 0.06
WNT3P56703 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3P56703 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.43■□□□□ 0.06
WNT3P56703 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
WNT3P56703 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
WNT3P56703 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
WNT3P56703 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
WNT3P56703 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
WNT3P56703 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3P56703 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.42■□□□□ 0.06
WNT3P56703 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.42■□□□□ 0.06
WNT3P56703 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3P56703 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
WNT3P56703 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3P56703 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.42■□□□□ 0.06
WNT3P56703 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3P56703 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
WNT3P56703 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
WNT3P56703 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3P56703 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
WNT3P56703 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms