Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.35■□□□□ 0.53
EPHB4P54760 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHB4P54760 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 AC116353.5-201ENST00000638148 1699 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.34■□□□□ 0.53
EPHB4P54760 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EPHB4P54760 AC026691.1-201ENST00000602502 2017 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 AC098614.1-201ENST00000368528 745 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EPHB4P54760 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 AC112492.5-201ENST00000421897 457 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 GNAQP1-201ENST00000444815 1067 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
EPHB4P54760 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 AL162274.1-201ENST00000617191 1098 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EPHB4P54760 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHB4P54760 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 SLC22A20-204ENST00000530038 1673 ntBASIC18.34■□□□□ 0.53
EPHB4P54760 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EPHB4P54760 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHB4P54760 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHB4P54760 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EPHB4P54760 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.33■□□□□ 0.53
EPHB4P54760 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.33■□□□□ 0.53
EPHB4P54760 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.33■□□□□ 0.53
EPHB4P54760 AL353732.1-201ENST00000569618 1459 ntBASIC18.33■□□□□ 0.53
EPHB4P54760 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHB4P54760 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.33■□□□□ 0.53
EPHB4P54760 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHB4P54760 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
EPHB4P54760 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.33■□□□□ 0.53
EPHB4P54760 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHB4P54760 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHB4P54760 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 MIR658-201ENST00000385210 100 ntBASIC18.33■□□□□ 0.52
EPHB4P54760 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.33■□□□□ 0.52
EPHB4P54760 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.33■□□□□ 0.52
EPHB4P54760 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHB4P54760 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
EPHB4P54760 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
EPHB4P54760 AC084346.2-201ENST00000607097 949 ntBASIC18.33■□□□□ 0.52
EPHB4P54760 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.33■□□□□ 0.52
EPHB4P54760 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
EPHB4P54760 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHB4P54760 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHB4P54760 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
EPHB4P54760 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHB4P54760 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 AC008741.2-201ENST00000612792 3115 ntBASIC18.32■□□□□ 0.52
EPHB4P54760 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EPHB4P54760 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHB4P54760 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHB4P54760 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHB4P54760 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHB4P54760 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHB4P54760 AC104794.3-201ENST00000566840 1248 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms