Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
ATXN3P54252 FO538757.1-201ENST00000623083 1397 ntBASIC16.77■□□□□ 0.27
ATXN3P54252 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
ATXN3P54252 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 LYSMD4-203ENST00000378904 2122 ntBASIC16.76■□□□□ 0.27
ATXN3P54252 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.76■□□□□ 0.27
ATXN3P54252 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 TREML5P-201ENST00000421694 576 ntBASIC16.76■□□□□ 0.27
ATXN3P54252 FAM58DP-201ENST00000428076 619 ntBASIC16.76■□□□□ 0.27
ATXN3P54252 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 AC243562.1-201ENST00000560672 389 ntBASIC16.76■□□□□ 0.27
ATXN3P54252 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.76■□□□□ 0.27
ATXN3P54252 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.76■□□□□ 0.27
ATXN3P54252 AC008761.3-201ENST00000624803 892 ntBASIC16.76■□□□□ 0.27
ATXN3P54252 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 AL358472.5-202ENST00000641448 1267 ntBASIC16.76■□□□□ 0.27
ATXN3P54252 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.76■□□□□ 0.27
ATXN3P54252 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ATXN3P54252 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATXN3P54252 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ATXN3P54252 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ATXN3P54252 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATXN3P54252 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
ATXN3P54252 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.75■□□□□ 0.27
ATXN3P54252 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
ATXN3P54252 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.75■□□□□ 0.27
ATXN3P54252 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.75■□□□□ 0.27
ATXN3P54252 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.75■□□□□ 0.27
ATXN3P54252 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.75■□□□□ 0.27
ATXN3P54252 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.75■□□□□ 0.27
ATXN3P54252 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATXN3P54252 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.75■□□□□ 0.27
ATXN3P54252 MIR4515-201ENST00000584082 81 ntBASIC16.75■□□□□ 0.27
ATXN3P54252 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.75■□□□□ 0.27
ATXN3P54252 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.75■□□□□ 0.27
ATXN3P54252 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATXN3P54252 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.75■□□□□ 0.27
ATXN3P54252 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATXN3P54252 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATXN3P54252 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.74■□□□□ 0.27
ATXN3P54252 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATXN3P54252 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.74■□□□□ 0.27
ATXN3P54252 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms