Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.86■□□□□ 0.13
CLCN2P51788 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.86■□□□□ 0.13
CLCN2P51788 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 ALOX12P2-203ENST00000570921 1945 ntBASIC15.86■□□□□ 0.13
CLCN2P51788 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
CLCN2P51788 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 AC087163.2-201ENST00000457299 853 ntBASIC15.86■□□□□ 0.13
CLCN2P51788 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.86■□□□□ 0.13
CLCN2P51788 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.86■□□□□ 0.13
CLCN2P51788 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN2P51788 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 AL021920.2-201ENST00000624828 1351 ntBASIC15.86■□□□□ 0.13
CLCN2P51788 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CLCN2P51788 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN2P51788 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLCN2P51788 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CLCN2P51788 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN2P51788 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN2P51788 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLCN2P51788 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CLCN2P51788 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CLCN2P51788 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLCN2P51788 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CLCN2P51788 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.85■□□□□ 0.13
CLCN2P51788 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN2P51788 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.85■□□□□ 0.13
CLCN2P51788 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 DUX4L17-201ENST00000557360 1267 ntBASIC15.85■□□□□ 0.13
CLCN2P51788 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLCN2P51788 OR7E47P-204ENST00000575924 449 ntBASIC15.85■□□□□ 0.13
CLCN2P51788 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN2P51788 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCN2P51788 AC023511.2-201ENST00000618803 211 ntBASIC15.85■□□□□ 0.13
CLCN2P51788 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN2P51788 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLCN2P51788 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN2P51788 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLCN2P51788 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN2P51788 AC007292.2-201ENST00000593524 1812 ntBASIC15.84■□□□□ 0.13
CLCN2P51788 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN2P51788 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN2P51788 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN2P51788 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms