Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MMP13P45452 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17■□□□□ 0.31
MMP13P45452 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
MMP13P45452 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MMP13P45452 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 RNU1-129P-201ENST00000384064 167 ntBASIC17■□□□□ 0.31
MMP13P45452 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17■□□□□ 0.31
MMP13P45452 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
MMP13P45452 NMU-202ENST00000505262 693 ntTSL 3 BASIC17■□□□□ 0.31
MMP13P45452 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17■□□□□ 0.31
MMP13P45452 PDPK2P-202ENST00000562415 1191 ntBASIC17■□□□□ 0.31
MMP13P45452 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17■□□□□ 0.31
MMP13P45452 U1.21-201ENST00000580816 167 ntBASIC17■□□□□ 0.31
MMP13P45452 AL671883.3-201ENST00000603274 991 ntBASIC17■□□□□ 0.31
MMP13P45452 AL031055.1-201ENST00000606362 631 ntBASIC17■□□□□ 0.31
MMP13P45452 AL512652.2-201ENST00000625156 1716 ntBASIC17■□□□□ 0.31
MMP13P45452 AC092865.6-201ENST00000642101 219 ntBASIC17■□□□□ 0.31
MMP13P45452 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 AC006058.4-201ENST00000624016 1670 ntBASIC17■□□□□ 0.31
MMP13P45452 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP13P45452 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17■□□□□ 0.31
MMP13P45452 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17■□□□□ 0.31
MMP13P45452 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17■□□□□ 0.31
MMP13P45452 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 GGT4P-201ENST00000623672 1708 ntBASIC16.99■□□□□ 0.31
MMP13P45452 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP13P45452 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 AC023274.1-201ENST00000418278 595 ntBASIC16.99■□□□□ 0.31
MMP13P45452 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP13P45452 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP13P45452 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.99■□□□□ 0.31
MMP13P45452 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 AC040169.1-201ENST00000565382 521 ntBASIC16.99■□□□□ 0.31
MMP13P45452 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
MMP13P45452 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP13P45452 TNRC18P2-201ENST00000417666 2714 ntBASIC16.99■□□□□ 0.31
MMP13P45452 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MMP13P45452 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP13P45452 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP13P45452 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP13P45452 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP13P45452 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.98■□□□□ 0.31
MMP13P45452 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 AC074386.1-202ENST00000463561 864 ntBASIC16.98■□□□□ 0.31
MMP13P45452 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.98■□□□□ 0.31
MMP13P45452 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms