Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 AC105020.1-201ENST00000435356 2205 ntBASIC14.98□□□□□ -0.01
RFC3P40938 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.98□□□□□ -0.01
RFC3P40938 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.97□□□□□ -0.01
RFC3P40938 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFC3P40938 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.97□□□□□ -0.01
RFC3P40938 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.97□□□□□ -0.01
RFC3P40938 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC3P40938 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RFC3P40938 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC3P40938 AL035633.1-201ENST00000406139 838 ntBASIC14.97□□□□□ -0.01
RFC3P40938 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RFC3P40938 AL512638.1-201ENST00000457493 794 ntBASIC14.97□□□□□ -0.01
RFC3P40938 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.97□□□□□ -0.01
RFC3P40938 RNA5SP410-201ENST00000516285 106 ntBASIC14.97□□□□□ -0.01
RFC3P40938 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC3P40938 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC3P40938 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC3P40938 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC3P40938 AJ011932.1-201ENST00000621707 465 ntBASIC14.97□□□□□ -0.01
RFC3P40938 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RFC3P40938 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.97□□□□□ -0.01
RFC3P40938 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
RFC3P40938 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.97□□□□□ -0.01
RFC3P40938 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 PCDHB19P-201ENST00000570871 2371 ntBASIC14.97□□□□□ -0.01
RFC3P40938 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFC3P40938 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFC3P40938 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC3P40938 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC3P40938 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC3P40938 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC3P40938 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RFC3P40938 AL031731.1-201ENST00000642131 2094 ntBASIC14.96□□□□□ -0.01
RFC3P40938 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RFC3P40938 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.96□□□□□ -0.01
RFC3P40938 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC3P40938 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RFC3P40938 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC3P40938 AC092580.3-201ENST00000430932 139 ntBASIC14.96□□□□□ -0.01
RFC3P40938 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC3P40938 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RFC3P40938 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC3P40938 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC3P40938 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC3P40938 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC3P40938 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC3P40938 AP002490.2-201ENST00000524791 560 ntBASIC14.96□□□□□ -0.01
RFC3P40938 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC3P40938 SPTSSB-204ENST00000617024 1292 ntBASIC14.96□□□□□ -0.01
RFC3P40938 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
RFC3P40938 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC3P40938 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC3P40938 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms