Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC004967.1-201ENST00000453589 447 ntBASIC15.77■□□□□ 0.12
CAPN3P20807 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.77■□□□□ 0.12
CAPN3P20807 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.77■□□□□ 0.12
CAPN3P20807 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 AC040169.1-201ENST00000565382 521 ntBASIC15.77■□□□□ 0.12
CAPN3P20807 MIR3197-201ENST00000582241 73 ntBASIC15.77■□□□□ 0.12
CAPN3P20807 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.77■□□□□ 0.12
CAPN3P20807 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.77■□□□□ 0.12
CAPN3P20807 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN3P20807 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN3P20807 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.77■□□□□ 0.11
CAPN3P20807 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.77■□□□□ 0.11
CAPN3P20807 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.77■□□□□ 0.11
CAPN3P20807 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CAPN3P20807 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.77■□□□□ 0.11
CAPN3P20807 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CAPN3P20807 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.77■□□□□ 0.11
CAPN3P20807 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN3P20807 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CAPN3P20807 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CAPN3P20807 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CAPN3P20807 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.76■□□□□ 0.11
CAPN3P20807 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CAPN3P20807 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.76■□□□□ 0.11
CAPN3P20807 MIR648-201ENST00000385046 94 ntBASIC15.76■□□□□ 0.11
CAPN3P20807 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 ELK2BP-201ENST00000415014 1224 ntBASIC15.76■□□□□ 0.11
CAPN3P20807 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPN3P20807 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPN3P20807 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPN3P20807 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPN3P20807 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.76■□□□□ 0.11
CAPN3P20807 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPN3P20807 AC010327.4-202ENST00000591484 748 ntBASIC15.76■□□□□ 0.11
CAPN3P20807 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN3P20807 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.76■□□□□ 0.11
CAPN3P20807 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.76■□□□□ 0.11
CAPN3P20807 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN3P20807 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 AC016027.1-202ENST00000607927 1699 ntBASIC15.76■□□□□ 0.11
CAPN3P20807 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CAPN3P20807 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN3P20807 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CAPN3P20807 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN3P20807 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN3P20807 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CAPN3P20807 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 RPS8P6-201ENST00000426177 609 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.75■□□□□ 0.11
CAPN3P20807 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 SART3-203ENST00000546611 1184 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 AC087641.1-201ENST00000557561 1021 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms