Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NELFEP18615 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 LINC02228-204ENST00000642115 2962 ntBASIC16.21■□□□□ 0.19
NELFEP18615 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.21■□□□□ 0.19
NELFEP18615 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFEP18615 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFEP18615 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NELFEP18615 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFEP18615 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.2■□□□□ 0.18
NELFEP18615 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.2■□□□□ 0.18
NELFEP18615 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.2■□□□□ 0.18
NELFEP18615 AC027796.2-201ENST00000575326 344 ntBASIC16.2■□□□□ 0.18
NELFEP18615 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.2■□□□□ 0.18
NELFEP18615 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.2■□□□□ 0.18
NELFEP18615 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.2■□□□□ 0.18
NELFEP18615 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NELFEP18615 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
NELFEP18615 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.2■□□□□ 0.18
NELFEP18615 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NELFEP18615 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
NELFEP18615 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFEP18615 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NELFEP18615 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
NELFEP18615 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 AL353732.1-201ENST00000569618 1459 ntBASIC16.19■□□□□ 0.18
NELFEP18615 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFEP18615 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NELFEP18615 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NELFEP18615 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.19■□□□□ 0.18
NELFEP18615 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFEP18615 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.19■□□□□ 0.18
NELFEP18615 AC004835.2-201ENST00000603762 682 ntBASIC16.19■□□□□ 0.18
NELFEP18615 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.19■□□□□ 0.18
NELFEP18615 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 AC012569.1-201ENST00000591191 1524 ntBASIC16.19■□□□□ 0.18
NELFEP18615 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.19■□□□□ 0.18
NELFEP18615 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NELFEP18615 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.19■□□□□ 0.18
NELFEP18615 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.19■□□□□ 0.18
NELFEP18615 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms