Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM17P0DL12 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM17P0DL12 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM17P0DL12 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 AC005336.2-201ENST00000593183 939 ntBASIC12.24□□□□□ -0.45
SMIM17P0DL12 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 LINC00895-201ENST00000629028 1637 ntBASIC12.24□□□□□ -0.45
SMIM17P0DL12 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.24□□□□□ -0.45
SMIM17P0DL12 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM17P0DL12 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM17P0DL12 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM17P0DL12 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM17P0DL12 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM17P0DL12 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AL020989.1-201ENST00000422979 469 ntBASIC12.23□□□□□ -0.45
SMIM17P0DL12 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AL353801.3-201ENST00000609898 542 ntBASIC12.23□□□□□ -0.45
SMIM17P0DL12 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.23□□□□□ -0.45
SMIM17P0DL12 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM17P0DL12 AP002414.2-201ENST00000591780 3365 ntBASIC12.22□□□□□ -0.45
SMIM17P0DL12 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM17P0DL12 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM17P0DL12 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM17P0DL12 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM17P0DL12 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM17P0DL12 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM17P0DL12 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms