Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.28■□□□□ 0.52
HOXC6P09630 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.28■□□□□ 0.52
HOXC6P09630 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC6P09630 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC6P09630 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC6P09630 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC6P09630 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC6P09630 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC6P09630 PCGF3-213ENST00000620529 1899 ntBASIC18.27■□□□□ 0.52
HOXC6P09630 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC6P09630 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC6P09630 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC6P09630 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC6P09630 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC6P09630 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC6P09630 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 AL442647.2-201ENST00000429864 857 ntBASIC18.27■□□□□ 0.52
HOXC6P09630 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.27■□□□□ 0.52
HOXC6P09630 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC6P09630 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.27■□□□□ 0.52
HOXC6P09630 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC6P09630 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.27■□□□□ 0.52
HOXC6P09630 MIR4525-201ENST00000580000 75 ntBASIC18.27■□□□□ 0.52
HOXC6P09630 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.27■□□□□ 0.52
HOXC6P09630 AC233724.13-201ENST00000598383 410 ntBASIC18.27■□□□□ 0.52
HOXC6P09630 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC6P09630 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.27■□□□□ 0.52
HOXC6P09630 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.27■□□□□ 0.51
HOXC6P09630 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC6P09630 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.27■□□□□ 0.51
HOXC6P09630 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC6P09630 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC6P09630 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC6P09630 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC6P09630 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC6P09630 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 FAM86MP-201ENST00000340703 885 ntBASIC18.26■□□□□ 0.51
HOXC6P09630 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 EEF1DP4-201ENST00000446006 880 ntBASIC18.26■□□□□ 0.51
HOXC6P09630 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.26■□□□□ 0.51
HOXC6P09630 BNIP3P42-201ENST00000454982 569 ntBASIC18.26■□□□□ 0.51
HOXC6P09630 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.26■□□□□ 0.51
HOXC6P09630 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.26■□□□□ 0.51
HOXC6P09630 BNIP3P29-201ENST00000598302 571 ntBASIC18.26■□□□□ 0.51
HOXC6P09630 AC011447.5-201ENST00000616168 564 ntBASIC18.26■□□□□ 0.51
HOXC6P09630 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HOXC6P09630 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 LINC01144-201ENST00000626198 1710 ntBASIC18.26■□□□□ 0.51
HOXC6P09630 AC005622.1-201ENST00000636801 1703 ntBASIC18.26■□□□□ 0.51
HOXC6P09630 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC6P09630 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HOXC6P09630 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.25■□□□□ 0.51
HOXC6P09630 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
HOXC6P09630 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HOXC6P09630 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.25■□□□□ 0.51
HOXC6P09630 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HOXC6P09630 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC6P09630 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXC6P09630 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXC6P09630 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
HOXC6P09630 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms