Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 AC068418.2-201ENST00000577309 3703 ntBASIC14.55□□□□□ -0.08
ERCC1P07992 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ERCC1P07992 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 RPSAP43-201ENST00000402237 625 ntBASIC14.55□□□□□ -0.08
ERCC1P07992 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 CXCL1P1-201ENST00000502804 216 ntBASIC14.55□□□□□ -0.08
ERCC1P07992 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.55□□□□□ -0.08
ERCC1P07992 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.55□□□□□ -0.08
ERCC1P07992 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ERCC1P07992 BCAR1-209ENST00000546196 1340 ntBASIC14.55□□□□□ -0.08
ERCC1P07992 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.55□□□□□ -0.08
ERCC1P07992 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.55□□□□□ -0.08
ERCC1P07992 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ERCC1P07992 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC1P07992 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC1P07992 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ERCC1P07992 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.54□□□□□ -0.08
ERCC1P07992 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.54□□□□□ -0.08
ERCC1P07992 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 AC211486.1-202ENST00000416371 468 ntBASIC14.54□□□□□ -0.08
ERCC1P07992 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 AC004967.1-201ENST00000453589 447 ntBASIC14.54□□□□□ -0.08
ERCC1P07992 AC211476.1-201ENST00000503899 468 ntBASIC14.54□□□□□ -0.08
ERCC1P07992 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.54□□□□□ -0.08
ERCC1P07992 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.54□□□□□ -0.08
ERCC1P07992 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.54□□□□□ -0.08
ERCC1P07992 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
ERCC1P07992 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.54□□□□□ -0.08
ERCC1P07992 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ERCC1P07992 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.54□□□□□ -0.08
ERCC1P07992 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.54□□□□□ -0.08
ERCC1P07992 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ERCC1P07992 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.54□□□□□ -0.08
ERCC1P07992 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC1P07992 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ERCC1P07992 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC1P07992 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ERCC1P07992 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 AC105917.1-201ENST00000506637 2539 ntBASIC14.53□□□□□ -0.08
ERCC1P07992 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms