Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC126755.1-201ENST00000525846 6405 ntBASIC16.95■□□□□ 0.3
IFNB1P01574 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.95■□□□□ 0.3
IFNB1P01574 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.95■□□□□ 0.3
IFNB1P01574 FAM185BP-201ENST00000443595 716 ntBASIC16.95■□□□□ 0.3
IFNB1P01574 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.95■□□□□ 0.3
IFNB1P01574 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.95■□□□□ 0.3
IFNB1P01574 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 MIR4515-201ENST00000584082 81 ntBASIC16.95■□□□□ 0.3
IFNB1P01574 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
IFNB1P01574 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
IFNB1P01574 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
IFNB1P01574 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.95■□□□□ 0.3
IFNB1P01574 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.95■□□□□ 0.3
IFNB1P01574 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
IFNB1P01574 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IFNB1P01574 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.94■□□□□ 0.3
IFNB1P01574 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
IFNB1P01574 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
IFNB1P01574 AC079781.3-201ENST00000449110 356 ntBASIC16.94■□□□□ 0.3
IFNB1P01574 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.94■□□□□ 0.3
IFNB1P01574 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.94■□□□□ 0.3
IFNB1P01574 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 LINC02447-202ENST00000501888 2146 ntBASIC16.94■□□□□ 0.3
IFNB1P01574 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
IFNB1P01574 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IFNB1P01574 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
IFNB1P01574 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.94■□□□□ 0.3
IFNB1P01574 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
IFNB1P01574 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 CDC14C-201ENST00000428251 1719 ntBASIC16.93■□□□□ 0.3
IFNB1P01574 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFNB1P01574 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
IFNB1P01574 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.93■□□□□ 0.3
IFNB1P01574 CXCL1P1-201ENST00000502804 216 ntBASIC16.93■□□□□ 0.3
IFNB1P01574 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.93■□□□□ 0.3
IFNB1P01574 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.93■□□□□ 0.3
IFNB1P01574 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.93■□□□□ 0.3
IFNB1P01574 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.93■□□□□ 0.3
IFNB1P01574 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.93■□□□□ 0.3
IFNB1P01574 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.93■□□□□ 0.3
IFNB1P01574 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms