Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.05■□□□□ -0
NKX2-2O95096 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NKX2-2O95096 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.05■□□□□ -0
NKX2-2O95096 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.05■□□□□ -0
NKX2-2O95096 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.05■□□□□ -0
NKX2-2O95096 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.05■□□□□ -0
NKX2-2O95096 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.05■□□□□ -0
NKX2-2O95096 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NKX2-2O95096 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.04■□□□□ -0
NKX2-2O95096 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.04■□□□□ -0
NKX2-2O95096 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NKX2-2O95096 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.04■□□□□ -0
NKX2-2O95096 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
NKX2-2O95096 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.04■□□□□ -0
NKX2-2O95096 AC010327.4-202ENST00000591484 748 ntBASIC15.04■□□□□ -0
NKX2-2O95096 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.04■□□□□ -0
NKX2-2O95096 AL513210.1-201ENST00000629608 234 ntBASIC15.04■□□□□ -0
NKX2-2O95096 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.04■□□□□ -0
NKX2-2O95096 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX2-2O95096 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.04■□□□□ -0
NKX2-2O95096 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 AC010491.1-201ENST00000563101 2797 ntBASIC15.03■□□□□ -0
NKX2-2O95096 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 LINC02199-201ENST00000506655 2702 ntBASIC15.03■□□□□ -0
NKX2-2O95096 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.03■□□□□ -0
NKX2-2O95096 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
NKX2-2O95096 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.03■□□□□ -0
NKX2-2O95096 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.03■□□□□ -0
NKX2-2O95096 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.03■□□□□ -0
NKX2-2O95096 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.03■□□□□ -0
NKX2-2O95096 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.03■□□□□ -0
NKX2-2O95096 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.03■□□□□ -0
NKX2-2O95096 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
NKX2-2O95096 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NKX2-2O95096 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-2O95096 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms