Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AL591424.1-201ENST00000442569 1213 ntBASIC18.16■□□□□ 0.5
CLSTN1O94985 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CLSTN1O94985 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 OR7E47P-204ENST00000575924 449 ntBASIC18.16■□□□□ 0.5
CLSTN1O94985 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.16■□□□□ 0.5
CLSTN1O94985 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.16■□□□□ 0.5
CLSTN1O94985 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 AL122018.1-201ENST00000446607 2310 ntBASIC18.16■□□□□ 0.5
CLSTN1O94985 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.16■□□□□ 0.5
CLSTN1O94985 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
CLSTN1O94985 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLSTN1O94985 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.15■□□□□ 0.5
CLSTN1O94985 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.15■□□□□ 0.5
CLSTN1O94985 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.15■□□□□ 0.5
CLSTN1O94985 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.15■□□□□ 0.5
CLSTN1O94985 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.15■□□□□ 0.5
CLSTN1O94985 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLSTN1O94985 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC18.15■□□□□ 0.5
CLSTN1O94985 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLSTN1O94985 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.15■□□□□ 0.5
CLSTN1O94985 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.15■□□□□ 0.5
CLSTN1O94985 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 PMS2P1-201ENST00000431037 1228 ntBASIC18.15■□□□□ 0.5
CLSTN1O94985 AP000347.1-202ENST00000435868 847 ntBASIC18.15■□□□□ 0.5
CLSTN1O94985 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.15■□□□□ 0.5
CLSTN1O94985 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.15■□□□□ 0.5
CLSTN1O94985 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.15■□□□□ 0.5
CLSTN1O94985 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.15■□□□□ 0.5
CLSTN1O94985 AC007064.4-201ENST00000637740 555 ntBASIC18.15■□□□□ 0.5
CLSTN1O94985 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.15■□□□□ 0.5
CLSTN1O94985 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.15■□□□□ 0.5
CLSTN1O94985 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLSTN1O94985 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.15■□□□□ 0.5
CLSTN1O94985 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLSTN1O94985 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.14■□□□□ 0.5
CLSTN1O94985 AC068418.2-201ENST00000577309 3703 ntBASIC18.14■□□□□ 0.5
CLSTN1O94985 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLSTN1O94985 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CLSTN1O94985 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CLSTN1O94985 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLSTN1O94985 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.14■□□□□ 0.49
CLSTN1O94985 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
CLSTN1O94985 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.14■□□□□ 0.49
CLSTN1O94985 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.14■□□□□ 0.49
CLSTN1O94985 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 IGLL3P-201ENST00000412472 434 ntBASIC18.14■□□□□ 0.49
CLSTN1O94985 AC023274.1-201ENST00000418278 595 ntBASIC18.14■□□□□ 0.49
CLSTN1O94985 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.14■□□□□ 0.49
CLSTN1O94985 HCG4B-203ENST00000450128 991 ntBASIC18.14■□□□□ 0.49
CLSTN1O94985 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.14■□□□□ 0.49
CLSTN1O94985 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.14■□□□□ 0.49
CLSTN1O94985 AC087641.1-201ENST00000557561 1021 ntBASIC18.14■□□□□ 0.49
CLSTN1O94985 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.14■□□□□ 0.49
CLSTN1O94985 MPDU1-223ENST00000582151 728 ntBASIC18.14■□□□□ 0.49
CLSTN1O94985 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 AC023141.13-201ENST00000604991 943 ntBASIC18.14■□□□□ 0.49
CLSTN1O94985 REXO1L3P-201ENST00000622202 1288 ntBASIC18.14■□□□□ 0.49
CLSTN1O94985 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms