Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFPL1O75677 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFPL1O75677 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.42■□□□□ 0.22
RFPL1O75677 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFPL1O75677 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
RFPL1O75677 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.41■□□□□ 0.22
RFPL1O75677 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 AC108751.1-201ENST00000490852 363 ntBASIC16.41■□□□□ 0.22
RFPL1O75677 RPS15P9-201ENST00000494093 319 ntBASIC16.41■□□□□ 0.22
RFPL1O75677 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.41■□□□□ 0.22
RFPL1O75677 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
RFPL1O75677 AC027796.2-201ENST00000575326 344 ntBASIC16.41■□□□□ 0.22
RFPL1O75677 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.41■□□□□ 0.22
RFPL1O75677 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.41■□□□□ 0.22
RFPL1O75677 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.41■□□□□ 0.22
RFPL1O75677 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.41■□□□□ 0.22
RFPL1O75677 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.41■□□□□ 0.22
RFPL1O75677 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.41■□□□□ 0.22
RFPL1O75677 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFPL1O75677 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFPL1O75677 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.41■□□□□ 0.22
RFPL1O75677 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.4■□□□□ 0.22
RFPL1O75677 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.4■□□□□ 0.22
RFPL1O75677 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.4■□□□□ 0.22
RFPL1O75677 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.4■□□□□ 0.22
RFPL1O75677 PPT1-215ENST00000641471 2368 ntBASIC16.4■□□□□ 0.22
RFPL1O75677 AC073621.1-201ENST00000392730 636 ntBASIC16.4■□□□□ 0.22
RFPL1O75677 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RFPL1O75677 AC211486.1-202ENST00000416371 468 ntBASIC16.4■□□□□ 0.22
RFPL1O75677 KRT18P27-201ENST00000427733 1299 ntBASIC16.4■□□□□ 0.22
RFPL1O75677 AC211476.1-201ENST00000503899 468 ntBASIC16.4■□□□□ 0.22
RFPL1O75677 AC136632.2-201ENST00000512891 861 ntBASIC16.4■□□□□ 0.22
RFPL1O75677 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.4■□□□□ 0.22
RFPL1O75677 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RFPL1O75677 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.4■□□□□ 0.22
RFPL1O75677 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFPL1O75677 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
RFPL1O75677 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.4■□□□□ 0.22
RFPL1O75677 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RFPL1O75677 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RFPL1O75677 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RFPL1O75677 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.39■□□□□ 0.21
RFPL1O75677 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFPL1O75677 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms