Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
HCN1O60741 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HCN1O60741 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 AC002056.1-201ENST00000395613 760 ntBASIC15.32■□□□□ 0.04
HCN1O60741 CNN2P11-201ENST00000429351 262 ntBASIC15.32■□□□□ 0.04
HCN1O60741 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.32■□□□□ 0.04
HCN1O60741 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HCN1O60741 AP002472.1-201ENST00000577490 586 ntBASIC15.32■□□□□ 0.04
HCN1O60741 MIR4515-201ENST00000584082 81 ntBASIC15.32■□□□□ 0.04
HCN1O60741 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HCN1O60741 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.32■□□□□ 0.04
HCN1O60741 REXO1L3P-201ENST00000622202 1288 ntBASIC15.32■□□□□ 0.04
HCN1O60741 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HCN1O60741 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.32■□□□□ 0.04
HCN1O60741 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.32■□□□□ 0.04
HCN1O60741 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.32■□□□□ 0.04
HCN1O60741 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 AL662844.4-201ENST00000606367 2838 ntBASIC15.31■□□□□ 0.04
HCN1O60741 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HCN1O60741 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
HCN1O60741 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.31■□□□□ 0.04
HCN1O60741 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.31■□□□□ 0.04
HCN1O60741 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.31■□□□□ 0.04
HCN1O60741 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HCN1O60741 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HCN1O60741 AL139011.1-202ENST00000642063 584 ntBASIC15.31■□□□□ 0.04
HCN1O60741 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HCN1O60741 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
HCN1O60741 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HCN1O60741 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.31■□□□□ 0.04
HCN1O60741 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HCN1O60741 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms