Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 CD99P1-205ENST00000527459 561 ntBASIC11.52□□□□□ -0.57
LINC01546A6NGU7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 AC010331.1-201ENST00000611423 582 ntBASIC11.52□□□□□ -0.57
LINC01546A6NGU7 HYMAI.1-201ENST00000620949 238 ntBASIC11.52□□□□□ -0.57
LINC01546A6NGU7 AC011558.1-201ENST00000623459 338 ntBASIC11.52□□□□□ -0.57
LINC01546A6NGU7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 KRT17P2-201ENST00000300992 1314 ntBASIC11.52□□□□□ -0.57
LINC01546A6NGU7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 AP002414.2-201ENST00000591780 3365 ntBASIC11.51□□□□□ -0.57
LINC01546A6NGU7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AC005840.4-201ENST00000541242 2494 ntBASIC11.51□□□□□ -0.57
LINC01546A6NGU7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 FAM8A3P-201ENST00000427218 844 ntBASIC11.51□□□□□ -0.57
LINC01546A6NGU7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AC087163.2-201ENST00000457299 853 ntBASIC11.51□□□□□ -0.57
LINC01546A6NGU7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AL160237.2-201ENST00000556165 472 ntBASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC01546A6NGU7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AL359183.1-201ENST00000623796 2132 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AC139749.1-202ENST00000617529 3139 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AC136759.1-202ENST00000530858 2194 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms