Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 AP001269.4-201ENST00000609611 512 ntBASIC14.25□□□□□ -0.13
SHISA3A0PJX4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 C18orf15-201ENST00000623680 2534 ntBASIC14.25□□□□□ -0.13
SHISA3A0PJX4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 AP005117.1-201ENST00000584346 1413 ntBASIC14.24□□□□□ -0.13
SHISA3A0PJX4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.24□□□□□ -0.13
SHISA3A0PJX4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 ARMC10P1-201ENST00000313754 855 ntBASIC14.24□□□□□ -0.13
SHISA3A0PJX4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 POM121L3P-201ENST00000419331 1163 ntBASIC14.24□□□□□ -0.13
SHISA3A0PJX4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 AC087641.1-201ENST00000557561 1021 ntBASIC14.24□□□□□ -0.13
SHISA3A0PJX4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 LINC00528-201ENST00000600723 2160 ntBASIC14.24□□□□□ -0.13
SHISA3A0PJX4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SHISA3A0PJX4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms