Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BIVM-ERCC5R4GMW8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
BIVM-ERCC5R4GMW8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BIVM-ERCC5R4GMW8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
BIVM-ERCC5R4GMW8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC26.63■■□□□ 1.85
BIVM-ERCC5R4GMW8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
BIVM-ERCC5R4GMW8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC26.62■■□□□ 1.85
BIVM-ERCC5R4GMW8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC026954.1-201ENST00000429771 1293 ntBASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC244093.1-201ENST00000610837 814 ntBASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 C2orf69P2-201ENST00000562032 1123 ntBASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC26.61■■□□□ 1.85
BIVM-ERCC5R4GMW8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 CYP2AB1P-202ENST00000454440 1456 ntBASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 DRD5P1-201ENST00000456605 1438 ntBASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 AL133267.1-201ENST00000398220 340 ntBASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 AP001063.1-201ENST00000568332 529 ntBASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BIVM-ERCC5R4GMW8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BIVM-ERCC5R4GMW8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 ZBTB12BP-201ENST00000314232 1122 ntBASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC093433.1-201ENST00000458048 571 ntBASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 GPR182-203ENST00000622922 591 ntBASIC26.58■■□□□ 1.85
BIVM-ERCC5R4GMW8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms