Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 SPDYE11-202ENST00000450699 704 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 KRT18P34-201ENST00000488218 1270 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 SPDYE9P-201ENST00000570642 692 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 SPDYE10P-202ENST00000612005 668 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 SPDYE8P-202ENST00000612377 668 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 AC006538.3-201ENST00000612495 578 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 AL691403.2-201ENST00000618460 490 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 AC055717.3-201ENST00000622967 595 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 AC134684.3-201ENST00000641758 218 ntBASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCA3PQ9Y6N3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCA3PQ9Y6N3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 AL512652.2-201ENST00000625156 1716 ntBASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 TFAMP1-201ENST00000412727 736 ntBASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 AC026120.1-201ENST00000611536 926 ntBASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCA3PQ9Y6N3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCA3PQ9Y6N3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms