Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CLIC4Q9Y696 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.64■□□□□ 0.58
CLIC4Q9Y696 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLIC4Q9Y696 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLIC4Q9Y696 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLIC4Q9Y696 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 AP002472.1-201ENST00000577490 586 ntBASIC18.63■□□□□ 0.57
CLIC4Q9Y696 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIC4Q9Y696 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 AC074386.1-202ENST00000463561 864 ntBASIC18.62■□□□□ 0.57
CLIC4Q9Y696 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 PDPK2P-202ENST00000562415 1191 ntBASIC18.62■□□□□ 0.57
CLIC4Q9Y696 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 AL589702.1-201ENST00000641229 1509 ntBASIC18.62■□□□□ 0.57
CLIC4Q9Y696 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 AC092384.3-202ENST00000564646 2873 ntBASIC18.62■□□□□ 0.57
CLIC4Q9Y696 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.62■□□□□ 0.57
CLIC4Q9Y696 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC4Q9Y696 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms