Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF11Q9Y3C5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 TPM4P1-201ENST00000436100 807 ntBASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 AL031055.1-201ENST00000606362 631 ntBASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 AL645728.2-201ENST00000641974 660 ntBASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF11Q9Y3C5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 AC010507.1-201ENST00000633895 436 ntBASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 AC005622.1-201ENST00000636801 1703 ntBASIC15.97■□□□□ 0.15
RNF11Q9Y3C5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RNF11Q9Y3C5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms