Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 TPM4P1-201ENST00000436100 807 ntBASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 AL662844.1-201ENST00000546340 181 ntBASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 AL049840.3-201ENST00000602669 611 ntBASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 AL513523.2-202ENST00000427283 2040 ntBASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 PRSS29P-201ENST00000440800 595 ntBASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 AL513480.1-201ENST00000451731 511 ntBASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 CXCL1P1-201ENST00000502804 216 ntBASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR1DQ9Y2S0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms