Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 UXT-AS1-201ENST00000590504 1525 ntBASIC17.21■□□□□ 0.34
PCDHGC3Q9UN70 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGC3Q9UN70 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGC3Q9UN70 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGC3Q9UN70 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 AC093520.2-201ENST00000561830 333 ntBASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC3Q9UN70 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 AC211486.1-202ENST00000416371 468 ntBASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 AL627223.1-201ENST00000416693 442 ntBASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 AC211476.1-201ENST00000503899 468 ntBASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 AP3S2-216ENST00000617003 1561 ntBASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGC3Q9UN70 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 AP006288.1-201ENST00000446065 395 ntBASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 RNA5SP410-201ENST00000516285 106 ntBASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 AC004835.2-201ENST00000603762 682 ntBASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGC3Q9UN70 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms