Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.3■□□□□ 0.2
SPASTQ9UBP0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 FO538757.1-201ENST00000623083 1397 ntBASIC16.29■□□□□ 0.2
SPASTQ9UBP0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 TREML5P-201ENST00000421694 576 ntBASIC16.29■□□□□ 0.2
SPASTQ9UBP0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.29■□□□□ 0.2
SPASTQ9UBP0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 AL158211.3-201ENST00000607385 239 ntBASIC16.29■□□□□ 0.2
SPASTQ9UBP0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPASTQ9UBP0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 AL035633.1-201ENST00000406139 838 ntBASIC16.28■□□□□ 0.2
SPASTQ9UBP0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 FLJ38576-201ENST00000623820 2459 ntBASIC16.28■□□□□ 0.2
SPASTQ9UBP0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 PCDHA14-201ENST00000506751 2298 ntBASIC16.28■□□□□ 0.2
SPASTQ9UBP0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SPASTQ9UBP0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.27■□□□□ 0.2
SPASTQ9UBP0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPASTQ9UBP0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPASTQ9UBP0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPASTQ9UBP0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPASTQ9UBP0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms