Protein–RNA interactions for Protein: Q9P032

NDUFAF4, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF4Q9P032 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.15■□□□□ 0.02
NDUFAF4Q9P032 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 U82695.1-201ENST00000635752 1889 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 SSR4P1-203ENST00000599569 2260 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 AC012569.1-201ENST00000591191 1524 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 AP003680.1-201ENST00000598970 3660 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TSPY19P-201ENST00000418461 509 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TSPY18P-201ENST00000441642 509 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 AL160237.2-201ENST00000556165 472 ntBASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFAF4Q9P032 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 AC008667.4-201ENST00000607370 168 ntBASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFAF4Q9P032 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms