Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 AP3S2-216ENST00000617003 1561 ntBASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 MIR6080-201ENST00000617359 66 ntBASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF304Q9HCX3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 AC008677.1-201ENST00000519230 1561 ntBASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 AC098859.1-201ENST00000502915 1238 ntBASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 RARRES2P9-201ENST00000565168 469 ntBASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 AC080080.1-201ENST00000625121 2420 ntBASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF304Q9HCX3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 FOXO1B-201ENST00000504678 1527 ntBASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF304Q9HCX3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms