Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CBX8Q9HC52 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX8Q9HC52 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX8Q9HC52 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX8Q9HC52 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CBX8Q9HC52 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX8Q9HC52 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX8Q9HC52 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX8Q9HC52 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CBX8Q9HC52 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 CICP24-201ENST00000605464 2705 ntBASIC18.28■□□□□ 0.52
CBX8Q9HC52 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 AC006504.4-201ENST00000592118 1568 ntBASIC18.28■□□□□ 0.52
CBX8Q9HC52 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CBX8Q9HC52 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX8Q9HC52 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 HCG4-201ENST00000418983 998 ntBASIC18.27■□□□□ 0.52
CBX8Q9HC52 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 KRT16P4-201ENST00000453883 522 ntBASIC18.27■□□□□ 0.52
CBX8Q9HC52 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 AC005412.3-201ENST00000580309 715 ntBASIC18.27■□□□□ 0.52
CBX8Q9HC52 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.27■□□□□ 0.52
CBX8Q9HC52 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX8Q9HC52 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.27■□□□□ 0.52
CBX8Q9HC52 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CBX8Q9HC52 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CBX8Q9HC52 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CBX8Q9HC52 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CBX8Q9HC52 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.27■□□□□ 0.51
CBX8Q9HC52 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CBX8Q9HC52 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CBX8Q9HC52 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CBX8Q9HC52 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.26■□□□□ 0.51
CBX8Q9HC52 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.26■□□□□ 0.51
CBX8Q9HC52 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CBX8Q9HC52 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.26■□□□□ 0.51
CBX8Q9HC52 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CBX8Q9HC52 ELK2BP-201ENST00000415014 1224 ntBASIC18.26■□□□□ 0.51
CBX8Q9HC52 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms