Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX6-2Q9C056 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 AC067750.1-201ENST00000608826 6545 ntBASIC13.29□□□□□ -0.28
NKX6-2Q9C056 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 TSPY12P-201ENST00000421279 868 ntBASIC13.29□□□□□ -0.28
NKX6-2Q9C056 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 KRT18P6-201ENST00000555540 1265 ntBASIC13.29□□□□□ -0.28
NKX6-2Q9C056 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.29□□□□□ -0.28
NKX6-2Q9C056 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 AC027601.5-201ENST00000624065 2482 ntBASIC13.29□□□□□ -0.28
NKX6-2Q9C056 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-2Q9C056 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 UNC93B2-201ENST00000285383 730 ntBASIC13.28□□□□□ -0.28
NKX6-2Q9C056 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 C2orf69P3-201ENST00000565542 1120 ntBASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms