Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SLC22A20-204ENST00000530038 1673 ntBASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 AC004832.2-201ENST00000426397 482 ntBASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 AC004967.1-201ENST00000453589 447 ntBASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 AP001160.2-201ENST00000596071 487 ntBASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 AC134684.3-201ENST00000641758 218 ntBASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXP3Q9BZS1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 HCG4-201ENST00000418983 998 ntBASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 AC005412.3-201ENST00000580309 715 ntBASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXP3Q9BZS1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.89■□□□□ 0.3
FOXP3Q9BZS1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.89■□□□□ 0.3
FOXP3Q9BZS1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
FOXP3Q9BZS1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.89■□□□□ 0.3
FOXP3Q9BZS1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
FOXP3Q9BZS1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
FOXP3Q9BZS1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
FOXP3Q9BZS1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms