Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AL162726.2-201ENST00000438986 1017 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 GOLGA2P4-201ENST00000441462 777 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 RPL13AP20-201ENST00000459725 609 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AP002490.2-201ENST00000524791 560 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AP000812.2-201ENST00000538934 718 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AL022328.1-201ENST00000610050 478 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC005252.2-201ENST00000624630 1141 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC068587.10-201ENST00000641210 219 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 HLA-A-202ENST00000376806 1854 ntBASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC8.34□□□□□ -1.08
KRTAP4-1Q9BYQ7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC012313.1-201ENST00000593393 3059 ntBASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 BRWD1P1-201ENST00000401091 371 ntBASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC004945.1-201ENST00000416738 983 ntBASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 FO681548.1-201ENST00000455617 1132 ntBASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC093433.1-201ENST00000458048 571 ntBASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 VDAC1P7-201ENST00000462417 847 ntBASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC8.33□□□□□ -1.08
KRTAP4-1Q9BYQ7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms