Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CIC-204ENST00000572681 8218 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 UNC93B2-201ENST00000285383 730 ntBASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC068472.1-201ENST00000474589 881 ntBASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 MTND2P7-201ENST00000521337 640 ntBASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 C2orf69P3-201ENST00000565542 1120 ntBASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC005332.3-201ENST00000589904 676 ntBASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 TK1-205ENST00000590862 642 ntTSL 3 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC006058.3-201ENST00000606217 1069 ntBASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LCE3DQ9BYE3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms