Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 AC244107.1-201ENST00000442033 332 ntBASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 AL512638.1-201ENST00000457493 794 ntBASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 SERBP1P5-201ENST00000510079 1181 ntBASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 AC009118.2-201ENST00000613275 655 ntBASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPAP1Q9BWH6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.77■□□□□ 0.75
RPAP1Q9BWH6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 AC063926.2-201ENST00000623766 1308 ntBASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 SPDYE22P-201ENST00000582158 798 ntBASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 AP3S2-216ENST00000617003 1561 ntBASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPAP1Q9BWH6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 HLA-H-201ENST00000383620 1096 ntBASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 HLA-V-204ENST00000476601 1289 ntBASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PRYP6-201ENST00000514804 343 ntBASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms