Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.44■□□□□ 0.38
YME1L1Q96TA2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 CROCCP4-201ENST00000457096 498 ntBASIC17.44■□□□□ 0.38
YME1L1Q96TA2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 AC104989.1-201ENST00000519711 778 ntBASIC17.44■□□□□ 0.38
YME1L1Q96TA2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 MIR4525-201ENST00000580000 75 ntBASIC17.44■□□□□ 0.38
YME1L1Q96TA2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 AL031731.1-201ENST00000642131 2094 ntBASIC17.44■□□□□ 0.38
YME1L1Q96TA2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
YME1L1Q96TA2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 RARRES2P5-201ENST00000564013 466 ntBASIC17.43■□□□□ 0.38
YME1L1Q96TA2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 AC025048.3-201ENST00000590609 569 ntBASIC17.43■□□□□ 0.38
YME1L1Q96TA2 AC005702.4-201ENST00000618393 416 ntBASIC17.43■□□□□ 0.38
YME1L1Q96TA2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YME1L1Q96TA2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 FAM86MP-201ENST00000340703 885 ntBASIC17.42■□□□□ 0.38
YME1L1Q96TA2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 AC010319.3-201ENST00000597028 470 ntBASIC17.42■□□□□ 0.38
YME1L1Q96TA2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 AL645728.1-201ENST00000366221 2101 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms