Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX18Q96RF0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX18Q96RF0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SNX18Q96RF0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.97□□□□□ -0.01
SNX18Q96RF0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SNX18Q96RF0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
SNX18Q96RF0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX18Q96RF0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX18Q96RF0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX18Q96RF0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX18Q96RF0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 IL9RP2-201ENST00000423948 1312 ntBASIC14.96□□□□□ -0.01
SNX18Q96RF0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 AL353732.1-201ENST00000569618 1459 ntBASIC14.96□□□□□ -0.01
SNX18Q96RF0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 PI4KAP1-204ENST00000612579 1703 ntBASIC14.96□□□□□ -0.01
SNX18Q96RF0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SNX18Q96RF0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX18Q96RF0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNX18Q96RF0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
SNX18Q96RF0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.96□□□□□ -0.02
SNX18Q96RF0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SNX18Q96RF0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNX18Q96RF0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.96□□□□□ -0.02
SNX18Q96RF0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNX18Q96RF0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNX18Q96RF0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
SNX18Q96RF0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AC131009.4-201ENST00000624048 1740 ntBASIC14.95□□□□□ -0.02
SNX18Q96RF0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 ELK2BP-201ENST00000415014 1224 ntBASIC14.95□□□□□ -0.02
SNX18Q96RF0 KRT18P27-201ENST00000427733 1299 ntBASIC14.95□□□□□ -0.02
SNX18Q96RF0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 RNPS1P1-201ENST00000507437 918 ntBASIC14.95□□□□□ -0.02
SNX18Q96RF0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AC021087.4-201ENST00000563761 564 ntBASIC14.95□□□□□ -0.02
SNX18Q96RF0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX18Q96RF0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX18Q96RF0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms